MolFoundry

Observable closure analysis

Examples from the paper

ExampleWebNotebook
ABAViewOpen
Molecular ROPViewOpen
Change the query—Open
Aldol addition—Open
Rémy treesViewOpen
Eight sitesViewOpen
ChlorinationViewOpen
DNA walker—Open

Notebook links open executable copies in Jupyter.

Performance comparison (FRAGGER comparison)

Additional examples
ExampleWebNotebook
Fixed ringViewOpen
Conditional growing ringViewOpen
Brusselator–ROPViewOpen